Fluffy Japanese Cotton Cheesecake Cupcakes – Light as a Cloud!

Before we dive into today’s recipe, I just want to say thank you. Whether you’re here for the first time or you’ve tried a few of my sweet creations already, your visits mean the world to me. And today? You’re in for such a treat — these Fluffy Japanese Cotton Cheesecake Cupcakes are a dream come true!

They’re tender, airy, and subtly sweet — a cross between a soufflé and a cheesecake. And trust me when I say: they melt in your mouth like a whisper.

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What Are Japanese Cotton Cheesecake Cupcakes?

Imagine your favorite creamy cheesecake… now give it a soft, cloud-like lift, a gentle bounce, and a lighter, fluffier texture. That’s what these mini cheesecakes are all about. They’re a Japanese twist on traditional cheesecake, and they bake up into individual cupcakes that are perfect for portion control — or not (I won’t judge if you go back for a second… or third 😉).

Close-up of a fluffy Japanese cotton cheesecake cupcake with a bite taken out, revealing its light, airy interior. The golden top is lightly dusted with powdered sugar, and the cupcake is wrapped in a white liner. Other cupcakes are softly blurred in the background.

Why You’ll Love This Recipe

  • Delicate texture – like a soufflé met a cheesecake and they fell in love.
  • Mildly sweet – not overly sugary, so it pairs beautifully with fruit or tea.
  • Portable & adorable – cupcakes just make everything more fun!
  • Perfect for beginners – sounds fancy, but the process is actually simple!

So… What Do They Taste Like?

These cupcakes are light, fluffy, and slightly tangy from the cream cheese. The top has a golden hue with a tender bite, while the inside is moist and airy. Think cheesecake, but with a pillow-soft sponge texture. The flavor is mellow, creamy, and just… well, heavenly.


Benefits of Making These Cheesecake Cupcakes

  • No water bath needed (unlike full-size Japanese cheesecakes!).
  • They cool faster and are easier to store.
  • You get consistent, individual portions.
  • Elegant enough for entertaining, simple enough for a weeknight dessert.

📝 Ingredients You’ll Need

  • 200g cream cheese, softened
  • 50g unsalted butter
  • 100ml milk
  • 4 large eggs, separated
  • 60g cake flour (or all-purpose flour sifted well)
  • 20g cornstarch
  • 1/4 tsp cream of tartar (optional, but helps stabilize the egg whites)
  • 70g sugar, divided

🧁 Tools You’ll Need

  • Muffin tin or cupcake tray
  • Cupcake liners
  • Hand mixer or stand mixer
  • Mixing bowls
  • Rubber spatula
  • Sifter
  • Cooling rack

🛠 Possible Additions & Substitutions

  • Swap vanilla extract for a floral twist like orange blossom or lemon zest.
  • Add a dollop of jam or fruit compote in the center before baking!
  • Substitute almond flour for a nuttier, gluten-free variation.
  • Top with whipped cream or fresh berries for serving.

👩‍🍳 Step-by-Step Instructions

  1. Preheat oven to 150°C (300°F). Line your muffin tray with cupcake liners.
  2. Melt cream cheese, butter, and milk over a double boiler or low heat. Stir until smooth and set aside to cool.
  3. Separate the eggs carefully – place the whites in a clean, grease-free bowl.
  4. Once the cheese mixture has cooled, whisk in the egg yolks, followed by sifted flour and cornstarch.
  5. Beat the egg whites with cream of tartar until foamy. Gradually add half the sugar and beat until soft peaks form.
  6. Gently fold the meringue into the yolk mixture in 3 parts. Do not overmix!
  7. Divide the batter into cupcake liners, filling about 80%.
  8. Place muffin tray in a larger pan with hot water (just a shallow amount!) and bake for 25–30 minutes.
  9. Let them cool in the oven with the door slightly open to prevent shrinkage.
  10. Dust with powdered sugar, if desired. Enjoy warm or chilled!

🍓 What to Serve With These

  • A drizzle of honey or maple syrup
  • Fresh berries or citrus segments
  • A steaming cup of green tea or Earl Grey
  • Dollop of light whipped cream with a mint sprig for a touch of elegance

✨ Tips for Success

  • Use room temperature ingredients to ensure smooth mixing.
  • Be gentle folding the egg whites — this keeps the cupcakes fluffy!
  • Avoid overbaking — they should jiggle just a little when done.
  • If you want that signature wrinkly cheesecake top, cool slowly with oven door slightly ajar.

🧊 How to Store

  • Store in an airtight container in the fridge for up to 4 days.
  • Best served at room temperature or slightly chilled.
  • Can be frozen for up to 1 month. Thaw in the fridge overnight.

📚 FAQs

Can I make these ahead?
Yes! They store beautifully and can even taste better after a few hours chilled.

Why did mine deflate?
Most likely from overmixing or opening the oven too soon. Be patient and gentle — your cupcakes will thank you!

Can I use a cupcake pan without liners?
You can, but be sure to grease it really well and flour the molds. Liners help preserve the delicate texture!

Is it okay to skip the water tray?
Technically yes, but it helps prevent cracking and keeps that cottony texture.


In Summary…

These Fluffy Japanese Cotton Cheesecake Cupcakes are the dessert you didn’t know you needed. Elegant, light, and anything but boring!! Whether you’re baking for a party or simply indulging in a soft bite of sweetness on a quiet afternoon, this recipe is sure to become a keeper. 💛

Craving more soft, fruity, or peachy bakes? Check out my:

  • Peach Yogurt Loaf Cake
  • Vanilla Peach Crumble Bars
  • Peach & Ricotta Tea Cake

💬 Share Your Creations!

If you make these, I’d love to see! Tag me on Pinterest or drop a photo in the comments below. Leave a review and let’s spread the cheesecake joy! 🧁✨


🧾 Nutritional Info (Per Cupcake – Approximate)

  • Calories: 145
  • Fat: 10g
  • Carbohydrates: 9g
  • Sugar: 6g
  • Protein: 4g

📩 Don’t forget to subscribe to get more heartfelt, delicious recipes sent straight to your inbox. Until next time, happy baking and soft, sweet bites ahead! 🍥💫

Close-up of a fluffy Japanese cotton cheesecake cupcake with a bite taken out, revealing its light, airy interior. The golden top is lightly dusted with powdered sugar, and the cupcake is wrapped in a white liner. Other cupcakes are softly blurred in the background.

Fluffy Japanese Cotton Cheesecake Cupcakes

These fluffy Japanese cotton cheesecake cupcakes are irresistibly light, airy, and mildly sweet — like a cloud you can bite into! Perfect for a delicate dessert or afternoon treat, they combine the creaminess of cheesecake with the soft bounce of a soufflé. Baked in cupcake form, they’re easy to portion and ideal for sharing (or not!).

Equipment

  • Muffin tin or cupcake tray
  • Cupcake liners
  • Hand or stand mixer
  • Mixing bowls
  • Rubber spatula
  • Sifter
  • Cooling rack
  • Oven

Ingredients
  

  • 200 g cream cheese softened
  • 50 g unsalted butter
  • 100 ml milk
  • 4 large eggs separated
  • 60 g cake flour or sifted all-purpose flour
  • 20 g cornstarch
  • 1/4 tsp cream of tartar optional
  • 70 g sugar divided
  • Powdered sugar for dusting optional

Instructions
 

  • Preheat oven to 150°C (300°F). Line a muffin tray with cupcake liners.
  • Melt cream cheese, butter, and milk over a double boiler or low heat until smooth. Let cool slightly.
  • In a bowl, whisk egg yolks into the cooled cheese mixture. Sift in flour and cornstarch; mix until smooth.
  • In a separate clean bowl, beat egg whites with cream of tartar until foamy. Gradually add sugar and beat to soft peaks.
  • Gently fold meringue into yolk mixture in 3 batches, keeping as much air as possible.
  • Fill cupcake liners about 80% full. Place muffin tray into a larger pan and add hot water to the outer pan (water bath).
  • Bake for 25–30 minutes until the tops are golden and set.
  • Turn off oven, crack the door open, and let cupcakes cool slowly to prevent shrinking.
  • Dust with powdered sugar and serve chilled or at room temperature.

Notes

For best texture, use room temperature ingredients.
Cream of tartar helps stabilize the meringue but can be omitted.
Avoid opening the oven while baking to prevent collapse.
Store in an airtight container in the fridge for up to 4 days, or freeze for up to 1 month.
Delicious with fresh berries, whipped cream, or a drizzle of honey.

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